Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916278.1_cds_XP_016465984.1_58887
CDS Infomation

[gene=LOC107788787] [db_xref=GeneID:107788787] [protein=probable aminotransferase TAT2] [protein_id=XP_016465984.1] [location=join(2575..2849,5162..5501,5588..5806,5893..5952,6271..6426,6514..6607,6820..7013)] [gbkey=CDS]
Sequence

ATGAAGGAGAACGGTGCAAAAACAAGATGGAATTTTAAAGAGAACGACAAGTTGTTGGCT
GGGTCGGGTGTCTCCATAAGAGTGGTTCGTAATACATTGATGCAGAGCGTCGACCCGTCA
GATACCCGACCCGTTATCCCTCTCTCCCACGGCGACCCTTCTTCCTTCTCCTGCTTTCGA
ACAACTCCCGTCGCTGAAGATGCTATTTTTGATTCCGTTCGCTCTGCTAAGTTCAACGGT
TATTCGTCCTCCGTCGGCATCCTTTCTGCTAGAAGGGCTGTAGCAGAACACTTATCTCAA
GATCTTCCATACAAGCTGTCCCCTGATGATGTTTACCTGACAATTGGATGTACTCAAGCA
ATTGAGATAATTTTGAATGTTCTTGCTCGCCCGAATGCAAATATTCTACTTCCAAGGCCT
GGATTTCCTTATTATGAAGCGCGAGCTGCATATAATCATCTTGAAATGCGTCACTTTAAT
CTTCTCCCCGAAAAGAAGTGGGAGGTGGACCTTAATGCAGTTGAGTCTTTGGCAGATGAA
AATACTGTTGCTATGGTCATTATTAATCCTGGAAATCCTTGTGGCAATGTCTACACATAC
CAACACTTGAAGGAGGTGGCGGAGATGGCAAGGAAGCTTGGAATTTTAGTTATTGCTGAT
GAAGTTTATGATCATCTTACTTTTGGAAGTAAACCATTTGTACCTATGGGAATCTTTGGA
TCGATTGCGCCTGTTATTACACTTGGATCCATATCAAAGAGGTGGATTGTCCCTGGTTGG
CGACTTGGTTGGCTTGTTACAAATGATCCAAATGGCATACTAAAAGAATATGGGGTCATA
GATTCTATTATGGGGTATCTCAATCTAATTTCTGACCCCGCAACCCTTATTCAGGGAGCA
ATACCTATGATCCTTCAGAAAACAAAAGATGATTTCTTCTCTAAAATAGTAAATATACTA
AGACAAGCTGCAGACATTTGTTATGACAAAATCAAGGATATACCTTGCATCACTTGCCCA
AGTAAACCTGAAGGATCTATGTCTGTGATGGTCAAACTTCATTTGAACCTTCTAGAAGAC
ATTGAAGATGACCTGGACTTCTGTGTCAAGCTTGCTAAGGAGGAGTCTTTAATAATTTTA
CCAGGTGTTACTGTAGGACTCAAGAATTGGCTCAGGATAACTTTTGCATGCGAACTATCA
ACTCTAGAAGATGGCCTCAAGAGACTAACTGCTTTCTGTCAAAGGCATGCAAAGAAAAAA
AATAAGCTTCTCTTAGAGGGAACCTTTTCTCTGCATTTTTGGGAAGTCTCAGATTCAACT
CAAGAGTTGAAAATGTGA

Peptide Sequence

PEP ID

XP_016465984.1
PEP Infomation

PREDICTED: probable aminotransferase TAT2 [Nicotiana tabacum]
Sequence

MKENGAKTRWNFKENDKLLAGSGVSIRVVRNTLMQSVDPSDTRPVIPLSHGDPSSFSCFR
TTPVAEDAIFDSVRSAKFNGYSSSVGILSARRAVAEHLSQDLPYKLSPDDVYLTIGCTQA
IEIILNVLARPNANILLPRPGFPYYEARAAYNHLEMRHFNLLPEKKWEVDLNAVESLADE
NTVAMVIINPGNPCGNVYTYQHLKEVAEMARKLGILVIADEVYDHLTFGSKPFVPMGIFG
SIAPVITLGSISKRWIVPGWRLGWLVTNDPNGILKEYGVIDSIMGYLNLISDPATLIQGA
IPMILQKTKDDFFSKIVNILRQAADICYDKIKDIPCITCPSKPEGSMSVMVKLHLNLLED
IEDDLDFCVKLAKEESLIILPGVTVGLKNWLRITFACELSTLEDGLKRLTAFCQRHAKKK
NKLLLEGTFSLHFWEVSDSTQELKM

Transcript Sequence

Gene sequence data has not been registered.